STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_3571InterPro IPR002035; KEGG: rlg:Rleg_5138 von Willebrand factor type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; PFAM: von Willebrand factor type A domain. (356 aa)    
Predicted Functional Partners:
Isop_3570
Von Willebrand factor type A; InterPro IPR002035; KEGG: cte:CT2278 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; PFAM: von Willebrand factor type A domain.
 
     0.934
Isop_3568
Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: gau:GAU_1525 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58.
 
    0.894
Isop_3569
Hypothetical protein; KEGG: fre:Franean1_4833 LuxR family transcriptional regulator; SPTR: Putative uncharacterized protein.
       0.788
Isop_3536
COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: plm:Plim_1164 magnesium protoporphyrin chelatase, putative; SPTR: Magnesium protoporphyrin chelatase, putative.
  
 
 0.601
Isop_0937
KEGG: rba:RB4703 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.596
Isop_0860
KEGG: psl:Psta_1696 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.588
Isop_0308
Cupin 2 conserved barrel domain protein; InterPro IPR013096; KEGG: mka:MK0873 mannose-6-phosphate isomerase; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Cupin 2 conserved barrel domain protein; PFAM: Cupin domain.
  
     0.532
Isop_2043
Hypothetical protein; InterPro IPR012902; KEGG: rba:RB6458 signal peptide; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.525
Isop_3567
ATPase associated with various cellular activities AAA_3; COGs: COG0714 MoxR-like ATPase; InterPro IPR016366: IPR011703; KEGG: shc:Shell_0365 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: ATPase, AAA family protein; PFAM: ATPase family associated with various cellular activities (AAA).
  
    0.502
Isop_0386
KEGG: kfl:Kfla_1513 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.501
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.