STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_3593KEGG: cpv:cgd5_2180 hypothetical protein; SPTR: Large low complexity protein with proline/alanine-rich repeat. (1293 aa)    
Predicted Functional Partners:
Isop_1843
Hypothetical protein; KEGG: dgr:Dgri_GH24162 GH24162 gene product from transcript GH24162-RA; SPTR: Kinesin K39, putative (ISS).
  
     0.666
Isop_0073
Hypothetical protein; InterPro IPR000209; KEGG: bja:blr0521 hypothetical protein; SPTR: Blr0521 protein.
  
     0.605
Isop_2664
KEGG: lma:LmjF34.0690 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.517
Isop_1001
InterPro IPR001129: IPR001446; KEGG: gvi:glr3057 glutathione S-transferase; PFAM: membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG); SPTR: Glr3057 protein; PFAM: MAPEG family.
  
     0.483
Isop_3594
COGs: COG3361 conserved hypothetical protein; KEGG: scl:sce2492 hypothetical protein; SPTR: Putative uncharacterized protein yqjF; PFAM: Uncharacterized conserved protein (COG2071).
       0.425
Isop_3595
COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991: IPR018107; KEGG: lhk:LHK_01881 sodium:dicarboxylate symporter; PFAM: sodium:dicarboxylate symporter; SPTR: C4-dicarboxylate transport protein; PFAM: Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.425
Isop_2500
Peptidase M10A and M12B matrixin and adamalysin; InterPro IPR001818: IPR021190; KEGG: hwa:HQ1193A cell surface glycoprotein; PFAM: peptidase M10A and M12B matrixin and adamalysin; SPTR: Probable cell surface glycoprotein; PFAM: Matrixin.
  
     0.414
Isop_1194
KEGG: mfa:Mfla_1237 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.408
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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