STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Isop_3594COGs: COG3361 conserved hypothetical protein; KEGG: scl:sce2492 hypothetical protein; SPTR: Putative uncharacterized protein yqjF; PFAM: Uncharacterized conserved protein (COG2071). (287 aa)    
Predicted Functional Partners:
Isop_3595
COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991: IPR018107; KEGG: lhk:LHK_01881 sodium:dicarboxylate symporter; PFAM: sodium:dicarboxylate symporter; SPTR: C4-dicarboxylate transport protein; PFAM: Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.773
Isop_3164
KEGG: hla:Hlac_0734 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.547
Isop_0903
Chlorite dismutase; COGs: COG3253 conserved hypothetical protein; InterPro IPR010644; KEGG: psl:Psta_0500 chlorite dismutase; PFAM: Chlorite dismutase; SPTR: Putative uncharacterized protein; PFAM: Chlorite dismutase.
  
     0.458
Isop_3504
Beta-carotene 15,15'-monooxygenase, Brp/Blh family; Catalyzes the cleavage of beta-carotene at its central double bond (15,15') to yield two molecules of all-trans-retinal. Belongs to the Brp/Blh beta-carotene diooxygenase family.
  
     0.439
Isop_3593
KEGG: cpv:cgd5_2180 hypothetical protein; SPTR: Large low complexity protein with proline/alanine-rich repeat.
       0.425
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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