STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_3597Lipolytic protein G-D-S-L family; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087: IPR017970; KEGG: plm:Plim_2575 lipolytic protein G-D-S-L family; PFAM: lipolytic protein G-D-S-L family; SPTR: Putative secreted protein; PFAM: GDSL-like Lipase/Acylhydrolase. (259 aa)    
Predicted Functional Partners:
Isop_1978
Sialate O-acetylesterase; InterPro IPR005181; KEGG: rba:RB10048 sialic acid-specific 9-O-acetylesterase; PFAM: protein of unknown function DUF303 acetylesterase; PRIAM: Sialate O-acetylesterase; SPTR: Sialic acid-specific 9-O-acetylesterase; PFAM: Domain of unknown function (DUF303).
  
     0.664
Isop_2044
Hypothetical protein; InterPro IPR013424; KEGG: rba:RB4575 signal peptide; SPTR: Putative uncharacterized protein.
   
 
 0.552
Isop_2375
Dockerin type 1; InterPro IPR018247: IPR018242; KEGG: aba:Acid345_4018 integrin-like protein; PFAM: Dockerin type 1; SPTR: Integrin-like protein; PFAM: Dockerin type I repeat.
   
 
 0.552
Isop_0247
InterPro IPR010496; KEGG: rmr:Rmar_1742 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080).
  
     0.462
Isop_3088
phospholipase/Carboxylesterase; COGs: COG4099 peptidase; InterPro IPR003140; KEGG: rba:RB9546 putative a hydrolase; PFAM: phospholipase/Carboxylesterase; SPTR: Putative uncharacterized protein; PFAM: Dienelactone hydrolase family.
  
     0.428
Isop_0278
Acetyl xylan esterase; InterPro IPR000834: IPR008391; KEGG: psl:Psta_2878 hypothetical protein; PFAM: Acetyl xylan esterase; SPTR: Putative uncharacterized protein; PFAM: Acetyl xylan esterase (AXE1).
 
     0.425
Isop_2907
InterPro IPR011701; KEGG: psl:Psta_3978 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.
  
     0.414
Isop_0067
KEGG: ttr:Tter_2666 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
   0.412
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.