STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFI16849.1Hypothetical protein. (282 aa)    
Predicted Functional Partners:
EFI16838.1
Transcriptional regulator, TetR family.
 
     0.725
EFI16823.1
ABC transporter, permease/ATP-binding protein.
 
     0.687
EFI16827.1
ABC transporter, permease/ATP-binding protein.
 
     0.642
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
 
      0.632
EFI16848.1
Cation efflux system protein.
       0.618
EFI17617.1
Transcriptional regulator, TetR family.
 
     0.605
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
     
 0.585
EFI16841.1
Hypothetical protein.
 
     0.540
EFI17460.1
Conserved hypothetical protein.
  
     0.492
EFI16996.1
Hypothetical protein.
  
     0.486
Your Current Organism:
Bacteroidetes F0058
NCBI taxonomy Id: 575590
Other names: B. oral taxon 274 str. F0058, Bacteroidetes oral taxon 274 str. F0058, Bacteroidetes oral taxon 274 strain F0058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.