Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFI15881.1 | EFI15882.1 | HMPREF0156_01329 | HMPREF0156_01330 | Acyl carrier protein. | 3-oxoacyl-(acyl-carrier-protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.956 |
EFI15881.1 | EFI15883.1 | HMPREF0156_01329 | HMPREF0156_01331 | Acyl carrier protein. | Conserved hypothetical protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.978 |
EFI15881.1 | EFI15884.1 | HMPREF0156_01329 | HMPREF0156_01332 | Acyl carrier protein. | Dehydratase. | 0.960 |
EFI15881.1 | EFI16414.1 | HMPREF0156_01329 | HMPREF0156_01864 | Acyl carrier protein. | Malonyl CoA-acyl carrier protein transacylase. | 0.949 |
EFI15881.1 | EFI16825.1 | HMPREF0156_01329 | HMPREF0156_00412 | Acyl carrier protein. | NAD dependent epimerase/dehydratase family protein. | 0.907 |
EFI15881.1 | EFI17543.1 | HMPREF0156_01329 | HMPREF0156_01140 | Acyl carrier protein. | Conserved hypothetical protein. | 0.901 |
EFI15881.1 | EFI17638.1 | HMPREF0156_01329 | HMPREF0156_01236 | Acyl carrier protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.939 |
EFI15881.1 | nuoA | HMPREF0156_01329 | HMPREF0156_01185 | Acyl carrier protein. | Proton-translocating NADH-quinone oxidoreductase, A subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. | 0.893 |
EFI15881.1 | nuoB | HMPREF0156_01329 | HMPREF0156_01186 | Acyl carrier protein. | NADH dehydrogenase I, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.931 |
EFI15881.1 | nuoD | HMPREF0156_01329 | HMPREF0156_01187 | Acyl carrier protein. | NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. | 0.998 |
EFI15882.1 | EFI15881.1 | HMPREF0156_01330 | HMPREF0156_01329 | 3-oxoacyl-(acyl-carrier-protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Acyl carrier protein. | 0.956 |
EFI15882.1 | EFI15883.1 | HMPREF0156_01330 | HMPREF0156_01331 | 3-oxoacyl-(acyl-carrier-protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Conserved hypothetical protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.934 |
EFI15882.1 | EFI15884.1 | HMPREF0156_01330 | HMPREF0156_01332 | 3-oxoacyl-(acyl-carrier-protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Dehydratase. | 0.951 |
EFI15882.1 | EFI16414.1 | HMPREF0156_01330 | HMPREF0156_01864 | 3-oxoacyl-(acyl-carrier-protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Malonyl CoA-acyl carrier protein transacylase. | 0.961 |
EFI15882.1 | EFI17543.1 | HMPREF0156_01330 | HMPREF0156_01140 | 3-oxoacyl-(acyl-carrier-protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Conserved hypothetical protein. | 0.532 |
EFI15882.1 | EFI17638.1 | HMPREF0156_01330 | HMPREF0156_01236 | 3-oxoacyl-(acyl-carrier-protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.757 |
EFI15883.1 | EFI15881.1 | HMPREF0156_01331 | HMPREF0156_01329 | Conserved hypothetical protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Acyl carrier protein. | 0.978 |
EFI15883.1 | EFI15882.1 | HMPREF0156_01331 | HMPREF0156_01330 | Conserved hypothetical protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 3-oxoacyl-(acyl-carrier-protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.934 |
EFI15883.1 | EFI15884.1 | HMPREF0156_01331 | HMPREF0156_01332 | Conserved hypothetical protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Dehydratase. | 0.978 |
EFI15883.1 | EFI16414.1 | HMPREF0156_01331 | HMPREF0156_01864 | Conserved hypothetical protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Malonyl CoA-acyl carrier protein transacylase. | 0.791 |
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