Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFI16272.1 | EFI16358.1 | HMPREF0156_01722 | HMPREF0156_01808 | RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator. | 0.416 |
| EFI16272.1 | EFI16359.1 | HMPREF0156_01722 | HMPREF0156_01809 | RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Cupin 2 domain-containing protein. | 0.562 |
| EFI16272.1 | EFI17398.1 | HMPREF0156_01722 | HMPREF0156_00995 | RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 4-carboxymuconolactone decarboxylase. | 0.668 |
| EFI16272.1 | EFI17409.1 | HMPREF0156_01722 | HMPREF0156_01006 | RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator, AraC-type. | 0.480 |
| EFI16272.1 | EFI17443.1 | HMPREF0156_01722 | HMPREF0156_01040 | RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sensory transduction histidine kinase. | 0.826 |
| EFI16272.1 | rpoA | HMPREF0156_01722 | HMPREF0156_00605 | RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.922 |
| EFI16356.1 | EFI16357.1 | HMPREF0156_01806 | HMPREF0156_01807 | Endoglucanase-related protein. | Pyrogenic exotoxin B. | 0.705 |
| EFI16356.1 | EFI16358.1 | HMPREF0156_01806 | HMPREF0156_01808 | Endoglucanase-related protein. | Transcriptional regulator. | 0.459 |
| EFI16357.1 | EFI16356.1 | HMPREF0156_01807 | HMPREF0156_01806 | Pyrogenic exotoxin B. | Endoglucanase-related protein. | 0.705 |
| EFI16357.1 | EFI16358.1 | HMPREF0156_01807 | HMPREF0156_01808 | Pyrogenic exotoxin B. | Transcriptional regulator. | 0.498 |
| EFI16358.1 | EFI16272.1 | HMPREF0156_01808 | HMPREF0156_01722 | Transcriptional regulator. | RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.416 |
| EFI16358.1 | EFI16356.1 | HMPREF0156_01808 | HMPREF0156_01806 | Transcriptional regulator. | Endoglucanase-related protein. | 0.459 |
| EFI16358.1 | EFI16357.1 | HMPREF0156_01808 | HMPREF0156_01807 | Transcriptional regulator. | Pyrogenic exotoxin B. | 0.498 |
| EFI16358.1 | EFI16359.1 | HMPREF0156_01808 | HMPREF0156_01809 | Transcriptional regulator. | Cupin 2 domain-containing protein. | 0.525 |
| EFI16358.1 | EFI16482.1 | HMPREF0156_01808 | HMPREF0156_00063 | Transcriptional regulator. | Periplasmic sensor signal transduction histidine kinase. | 0.471 |
| EFI16358.1 | EFI17398.1 | HMPREF0156_01808 | HMPREF0156_00995 | Transcriptional regulator. | 4-carboxymuconolactone decarboxylase. | 0.427 |
| EFI16358.1 | EFI17409.1 | HMPREF0156_01808 | HMPREF0156_01006 | Transcriptional regulator. | Transcriptional regulator, AraC-type. | 0.552 |
| EFI16358.1 | EFI17443.1 | HMPREF0156_01808 | HMPREF0156_01040 | Transcriptional regulator. | Sensory transduction histidine kinase. | 0.615 |
| EFI16358.1 | EFI17638.1 | HMPREF0156_01808 | HMPREF0156_01236 | Transcriptional regulator. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.663 |
| EFI16358.1 | rpoA | HMPREF0156_01808 | HMPREF0156_00605 | Transcriptional regulator. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.684 |
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