STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGG92057.1Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (80 aa)    
Predicted Functional Partners:
EGG92058.1
Hypothetical protein.
       0.773
EGG92309.1
Hypothetical protein.
 
     0.703
EGG91543.1
Excisionase transposon.
       0.653
EGG92641.1
Flavodoxin.
 
     0.576
rlmH
Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.523
EGG92401.1
Hypothetical protein.
       0.518
EGG91212.1
Hypothetical protein.
       0.489
EGG92509.1
Hypothetical protein; Belongs to the TelA family.
       0.485
EGG91727.1
Hypothetical protein; Belongs to the TelA family.
       0.485
EGG91618.1
Hypothetical protein.
       0.480
Your Current Organism:
Lachnospiraceae F0167
NCBI taxonomy Id: 575593
Other names: L. oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 strain F0167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.