Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGG89749.1 | EGG89754.1 | HMPREF0491_00879 | HMPREF0491_00884 | Hypothetical protein. | Hypothetical protein. | 0.999 |
EGG89749.1 | EGG92151.1 | HMPREF0491_00879 | HMPREF0491_00178 | Hypothetical protein. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.958 |
EGG89749.1 | EGG92152.1 | HMPREF0491_00879 | HMPREF0491_00179 | Hypothetical protein. | Rod shape-determining protein MreD. | 0.947 |
EGG89749.1 | EGG92153.1 | HMPREF0491_00879 | HMPREF0491_00180 | Hypothetical protein. | Hypothetical protein. | 0.995 |
EGG89749.1 | EGG92154.1 | HMPREF0491_00879 | HMPREF0491_00181 | Hypothetical protein. | Hypothetical protein; Belongs to the SEDS family. | 0.995 |
EGG89749.1 | mraY | HMPREF0491_00879 | HMPREF0491_00883 | Hypothetical protein. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.998 |
EGG89749.1 | murC | HMPREF0491_00879 | HMPREF0491_01887 | Hypothetical protein. | UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.996 |
EGG89749.1 | murD | HMPREF0491_00879 | HMPREF0491_00882 | Hypothetical protein. | UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.999 |
EGG89749.1 | murG | HMPREF0491_00879 | HMPREF0491_01482 | Hypothetical protein. | Hypothetical protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.996 |
EGG89754.1 | EGG89749.1 | HMPREF0491_00884 | HMPREF0491_00879 | Hypothetical protein. | Hypothetical protein. | 0.999 |
EGG89754.1 | EGG92151.1 | HMPREF0491_00884 | HMPREF0491_00178 | Hypothetical protein. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.980 |
EGG89754.1 | EGG92152.1 | HMPREF0491_00884 | HMPREF0491_00179 | Hypothetical protein. | Rod shape-determining protein MreD. | 0.951 |
EGG89754.1 | EGG92153.1 | HMPREF0491_00884 | HMPREF0491_00180 | Hypothetical protein. | Hypothetical protein. | 0.769 |
EGG89754.1 | EGG92154.1 | HMPREF0491_00884 | HMPREF0491_00181 | Hypothetical protein. | Hypothetical protein; Belongs to the SEDS family. | 0.996 |
EGG89754.1 | mgsA | HMPREF0491_00884 | HMPREF0491_00182 | Hypothetical protein. | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | 0.738 |
EGG89754.1 | mraY | HMPREF0491_00884 | HMPREF0491_00883 | Hypothetical protein. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.998 |
EGG89754.1 | murC | HMPREF0491_00884 | HMPREF0491_01887 | Hypothetical protein. | UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.971 |
EGG89754.1 | murD | HMPREF0491_00884 | HMPREF0491_00882 | Hypothetical protein. | UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.999 |
EGG89754.1 | murG | HMPREF0491_00884 | HMPREF0491_01482 | Hypothetical protein. | Hypothetical protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.984 |
EGG92151.1 | EGG89749.1 | HMPREF0491_00178 | HMPREF0491_00879 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Hypothetical protein. | 0.958 |
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