Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGG90810.1 | EGG91588.1 | HMPREF0491_02666 | HMPREF0491_00254 | Hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Hypothetical protein. | 0.968 |
EGG90810.1 | EGG91590.1 | HMPREF0491_02666 | HMPREF0491_00256 | Hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.997 |
EGG90810.1 | EGG91592.1 | HMPREF0491_02666 | HMPREF0491_00258 | Hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.964 |
EGG90810.1 | EGG91593.1 | HMPREF0491_02666 | HMPREF0491_00259 | Hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Hypothetical protein; Belongs to the CinA family. | 0.998 |
EGG90810.1 | EGG92190.1 | HMPREF0491_02666 | HMPREF0491_00217 | Hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Pyruvate:ferredoxin oxidoreductase. | 0.992 |
EGG90810.1 | folD | HMPREF0491_02666 | HMPREF0491_00265 | Hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Hypothetical protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.993 |
EGG90810.1 | gmk | HMPREF0491_02666 | HMPREF0491_00255 | Hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.983 |
EGG90810.1 | pnp | HMPREF0491_02666 | HMPREF0491_00443 | Hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.960 |
EGG90810.1 | rimO | HMPREF0491_02666 | HMPREF0491_00257 | Hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.987 |
EGG91588.1 | EGG90810.1 | HMPREF0491_00254 | HMPREF0491_02666 | Hypothetical protein. | Hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.968 |
EGG91588.1 | EGG91590.1 | HMPREF0491_00254 | HMPREF0491_00256 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.998 |
EGG91588.1 | EGG91592.1 | HMPREF0491_00254 | HMPREF0491_00258 | Hypothetical protein. | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.985 |
EGG91588.1 | EGG91593.1 | HMPREF0491_00254 | HMPREF0491_00259 | Hypothetical protein. | Hypothetical protein; Belongs to the CinA family. | 0.992 |
EGG91588.1 | EGG91595.1 | HMPREF0491_00254 | HMPREF0491_00261 | Hypothetical protein. | Hypothetical protein. | 0.881 |
EGG91588.1 | EGG92190.1 | HMPREF0491_00254 | HMPREF0491_00217 | Hypothetical protein. | Pyruvate:ferredoxin oxidoreductase. | 0.964 |
EGG91588.1 | folD | HMPREF0491_00254 | HMPREF0491_00265 | Hypothetical protein. | Hypothetical protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.587 |
EGG91588.1 | gmk | HMPREF0491_00254 | HMPREF0491_00255 | Hypothetical protein. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.998 |
EGG91588.1 | rimO | HMPREF0491_00254 | HMPREF0491_00257 | Hypothetical protein. | MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.985 |
EGG91590.1 | EGG90810.1 | HMPREF0491_00256 | HMPREF0491_02666 | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.997 |
EGG91590.1 | EGG91588.1 | HMPREF0491_00256 | HMPREF0491_00254 | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Hypothetical protein. | 0.998 |
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