STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGG91150.1Hypothetical protein. (160 aa)    
Predicted Functional Partners:
EGG86549.1
Hypothetical protein.
 
    0.983
EGG91769.1
Hypothetical protein.
 
     0.958
EGG89683.1
Hypothetical protein.
 
     0.859
EGG91136.1
Hypothetical protein.
 
      0.844
EGG91407.1
Hypothetical protein.
       0.839
EGG91149.1
Hypothetical protein.
       0.773
EGG92190.1
Pyruvate:ferredoxin oxidoreductase.
       0.767
EGG92124.1
Hypothetical protein.
  
     0.756
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
       0.751
EGG89700.1
Isocitrate dehydrogenase; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
       0.737
Your Current Organism:
Lachnospiraceae F0167
NCBI taxonomy Id: 575593
Other names: L. oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 strain F0167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.