Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGG91135.1 | EGG91233.1 | HMPREF0491_00316 | HMPREF0491_00414 | Hypothetical protein. | Hypothetical protein. | 0.892 |
EGG91135.1 | EGG91236.1 | HMPREF0491_00316 | HMPREF0491_00417 | Hypothetical protein. | Hypothetical protein. | 0.980 |
EGG91135.1 | EGG91237.1 | HMPREF0491_00316 | HMPREF0491_00418 | Hypothetical protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.969 |
EGG91135.1 | EGG91757.1 | HMPREF0491_00316 | HMPREF0491_01884 | Hypothetical protein. | Hypothetical protein. | 0.827 |
EGG91135.1 | guaA | HMPREF0491_00316 | HMPREF0491_01718 | Hypothetical protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.954 |
EGG91135.1 | nadE | HMPREF0491_00316 | HMPREF0491_00890 | Hypothetical protein. | Hypothetical protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.986 |
EGG91135.1 | nnrD | HMPREF0491_00316 | HMPREF0491_00419 | Hypothetical protein. | YjeF; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | 0.962 |
EGG91135.1 | rex | HMPREF0491_00316 | HMPREF0491_00421 | Hypothetical protein. | Hypothetical protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. | 0.528 |
EGG91135.1 | secF | HMPREF0491_00316 | HMPREF0491_00906 | Hypothetical protein. | Hypothetical protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.949 |
EGG91135.1 | ybeY | HMPREF0491_00316 | HMPREF0491_00164 | Hypothetical protein. | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.974 |
EGG91233.1 | EGG91135.1 | HMPREF0491_00414 | HMPREF0491_00316 | Hypothetical protein. | Hypothetical protein. | 0.892 |
EGG91233.1 | EGG91236.1 | HMPREF0491_00414 | HMPREF0491_00417 | Hypothetical protein. | Hypothetical protein. | 0.987 |
EGG91233.1 | EGG91237.1 | HMPREF0491_00414 | HMPREF0491_00418 | Hypothetical protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.971 |
EGG91233.1 | EGG91757.1 | HMPREF0491_00414 | HMPREF0491_01884 | Hypothetical protein. | Hypothetical protein. | 0.587 |
EGG91233.1 | guaA | HMPREF0491_00414 | HMPREF0491_01718 | Hypothetical protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.928 |
EGG91233.1 | nadE | HMPREF0491_00414 | HMPREF0491_00890 | Hypothetical protein. | Hypothetical protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.990 |
EGG91233.1 | nnrD | HMPREF0491_00414 | HMPREF0491_00419 | Hypothetical protein. | YjeF; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | 0.980 |
EGG91233.1 | rex | HMPREF0491_00414 | HMPREF0491_00421 | Hypothetical protein. | Hypothetical protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. | 0.955 |
EGG91233.1 | secF | HMPREF0491_00414 | HMPREF0491_00906 | Hypothetical protein. | Hypothetical protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.985 |
EGG91233.1 | ybeY | HMPREF0491_00414 | HMPREF0491_00164 | Hypothetical protein. | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.731 |
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