STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGG90651.1Hypothetical protein. (469 aa)    
Predicted Functional Partners:
EGG86654.1
Hypothetical protein.
  
  
 0.995
EGG87780.1
Hypothetical protein.
 
  
 0.983
EGG86653.1
PTS system protein.
  
  
 0.969
EGG90459.1
Hypothetical protein.
  
  
 0.949
EGG90519.1
Hypothetical protein; Belongs to the carbohydrate kinase PfkB family.
 
 0.929
EGG90653.1
Hypothetical protein.
 
  
 0.920
EGG91605.1
Hypothetical protein.
 
  
 0.901
EGG90652.1
Hypothetical protein.
     
 0.898
EGG92375.1
Hypothetical protein.
  
 
 0.893
EGG90655.1
Hypothetical protein.
 
    
0.888
Your Current Organism:
Lachnospiraceae F0167
NCBI taxonomy Id: 575593
Other names: L. oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 strain F0167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.