STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGG90669.1Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. (385 aa)    
Predicted Functional Partners:
EGG90671.1
Hypothetical protein.
  
 0.997
EGG90670.1
Hypothetical protein.
  
 0.991
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.972
EGG91567.1
Hypothetical protein.
  
 0.948
EGG87776.1
Hypothetical protein.
  
 0.921
EGG91566.1
Hypothetical protein.
 
  
 0.920
EGG91607.1
Hypothetical protein.
  
 0.915
EGG91453.1
Hypothetical protein.
  
 0.915
rbsA-3
Hypothetical protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.913
EGG91606.1
Hypothetical protein.
 
  
 0.911
Your Current Organism:
Lachnospiraceae F0167
NCBI taxonomy Id: 575593
Other names: L. oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 strain F0167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.