STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGG90697.1Hypothetical protein. (324 aa)    
Predicted Functional Partners:
EGG91016.1
Hypothetical protein.
  
  
 0.995
EGG90496.1
Hypothetical protein.
  
  
 0.995
EGG88309.1
Hypothetical protein.
  
  
 0.995
EGG87893.1
Hypothetical protein.
  
  
 0.995
EGG91883.1
Hypothetical protein.
 
   
 0.988
EGG90794.1
Hypothetical protein.
  
  
 0.986
EGG90661.1
Hypothetical protein.
 
  
 0.985
EGG92502.1
Hypothetical protein.
  
  
 0.984
EGG90497.1
Hypothetical protein.
  
  
 0.974
EGG88594.1
Hypothetical protein.
 
   
 0.973
Your Current Organism:
Lachnospiraceae F0167
NCBI taxonomy Id: 575593
Other names: L. oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 strain F0167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.