Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGG89672.1 | EGG89675.1 | HMPREF0491_00802 | HMPREF0491_00805 | Hypothetical protein. | Hypothetical protein. | 0.977 |
EGG89672.1 | EGG89676.1 | HMPREF0491_00802 | HMPREF0491_00806 | Hypothetical protein. | Hypothetical protein; Belongs to the aspartokinase family. | 0.963 |
EGG89672.1 | EGG90810.1 | HMPREF0491_00802 | HMPREF0491_02666 | Hypothetical protein. | Hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.975 |
EGG89672.1 | EGG90843.1 | HMPREF0491_00802 | HMPREF0491_02606 | Hypothetical protein. | Hypothetical protein. | 0.835 |
EGG89672.1 | EGG91439.1 | HMPREF0491_00802 | HMPREF0491_02204 | Hypothetical protein. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.843 |
EGG89672.1 | EGG91593.1 | HMPREF0491_00802 | HMPREF0491_00259 | Hypothetical protein. | Hypothetical protein; Belongs to the CinA family. | 0.732 |
EGG89672.1 | EGG92107.1 | HMPREF0491_00802 | HMPREF0491_00134 | Hypothetical protein. | Hypothetical protein. | 0.753 |
EGG89672.1 | cmk | HMPREF0491_00802 | HMPREF0491_00804 | Hypothetical protein. | Cytidylate kinase. | 0.998 |
EGG89672.1 | ispH | HMPREF0491_00802 | HMPREF0491_00803 | Hypothetical protein. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.997 |
EGG89675.1 | EGG89672.1 | HMPREF0491_00805 | HMPREF0491_00802 | Hypothetical protein. | Hypothetical protein. | 0.977 |
EGG89675.1 | EGG89676.1 | HMPREF0491_00805 | HMPREF0491_00806 | Hypothetical protein. | Hypothetical protein; Belongs to the aspartokinase family. | 0.977 |
EGG89675.1 | EGG90810.1 | HMPREF0491_00805 | HMPREF0491_02666 | Hypothetical protein. | Hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.914 |
EGG89675.1 | EGG90843.1 | HMPREF0491_00805 | HMPREF0491_02606 | Hypothetical protein. | Hypothetical protein. | 0.936 |
EGG89675.1 | EGG91439.1 | HMPREF0491_00805 | HMPREF0491_02204 | Hypothetical protein. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.909 |
EGG89675.1 | EGG91593.1 | HMPREF0491_00805 | HMPREF0491_00259 | Hypothetical protein. | Hypothetical protein; Belongs to the CinA family. | 0.941 |
EGG89675.1 | EGG92107.1 | HMPREF0491_00805 | HMPREF0491_00134 | Hypothetical protein. | Hypothetical protein. | 0.907 |
EGG89675.1 | EGG92633.1 | HMPREF0491_00805 | HMPREF0491_01152 | Hypothetical protein. | Hypothetical protein. | 0.903 |
EGG89675.1 | cmk | HMPREF0491_00805 | HMPREF0491_00804 | Hypothetical protein. | Cytidylate kinase. | 0.995 |
EGG89675.1 | ispH | HMPREF0491_00805 | HMPREF0491_00803 | Hypothetical protein. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.993 |
EGG89676.1 | EGG89672.1 | HMPREF0491_00806 | HMPREF0491_00802 | Hypothetical protein; Belongs to the aspartokinase family. | Hypothetical protein. | 0.963 |
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