STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGG87828.1Hypothetical protein. (443 aa)    
Predicted Functional Partners:
EGG91614.1
Hypothetical protein.
 
     0.528
EGG86651.1
Hypothetical protein.
  
     0.462
EGG91643.1
Hypothetical protein.
       0.434
EGG91028.1
Hypothetical protein.
       0.434
EGG91015.1
Hypothetical protein.
       0.434
EGG90842.1
Hypothetical protein.
       0.434
EGG87740.1
Hypothetical protein.
       0.434
EGG85749.1
Hypothetical protein.
       0.434
EGG86620.1
Thioredoxin; Belongs to the thioredoxin family.
       0.408
EGG87829.1
Hypothetical protein.
       0.403
Your Current Organism:
Lachnospiraceae F0167
NCBI taxonomy Id: 575593
Other names: L. oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 strain F0167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.