STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGG92575.1NifU family SUF system FeS assembly protein. (140 aa)    
Predicted Functional Partners:
EGG89711.1
Hypothetical protein.
  
 0.999
EGG92555.1
Hypothetical protein.
  
 0.999
EGG92571.1
FeS assembly ATPase SufC.
 
  
 0.999
EGG92572.1
FeS assembly protein SufB.
 
  
 0.999
EGG92573.1
Hypothetical protein.
 
  
 0.999
EGG92574.1
Hypothetical protein; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.999
EGG92190.1
Pyruvate:ferredoxin oxidoreductase.
  
  
 0.998
EGG91784.1
Cysteine desulfurase.
 
 
 0.997
EGG91788.1
YqeB family selenium-dependent molybdenum hydroxylase system protein.
  
 
 0.991
mnmA
tRNA-specific 2-thiouridylase mnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
  
  
 0.989
Your Current Organism:
Lachnospiraceae F0167
NCBI taxonomy Id: 575593
Other names: L. oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 strain F0167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.