STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGG92396.1Hypothetical protein. (285 aa)    
Predicted Functional Partners:
EGG89702.1
seryl-tRNA synthetase.
       0.959
EGG92389.1
Hypothetical protein; Belongs to the ParB family.
       0.959
EGG92390.1
Hypothetical protein.
 
     0.953
EGG92398.1
Hypothetical protein.
       0.905
EGG92382.1
Hypothetical protein.
 
     0.813
EGG92388.1
Hypothetical protein.
       0.792
EGG90078.1
Hypothetical protein.
       0.792
EGG89084.1
Hypothetical protein.
       0.792
EGG92339.1
Hypothetical protein.
 
     0.791
EGG92529.1
Hypothetical protein.
  
     0.774
Your Current Organism:
Lachnospiraceae F0167
NCBI taxonomy Id: 575593
Other names: L. oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 strain F0167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.