STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGG92411.1Hypothetical protein. (593 aa)    
Predicted Functional Partners:
EGG90865.1
Hypothetical protein.
 
   
 0.997
EGG91883.1
Hypothetical protein.
 
  
 0.994
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
     
 0.991
EGG90459.1
Hypothetical protein.
 
  
 0.986
EGG91338.1
Undecaprenyl-phosphate glucose phosphotransferase.
     
 0.985
EGG91334.1
Hypothetical protein.
 
  
 0.982
EGG90869.1
Hypothetical protein; Belongs to the BCCT transporter (TC 2.A.15) family.
 
   
 0.981
EGG90868.1
Hypothetical protein; Belongs to the BCCT transporter (TC 2.A.15) family.
 
   
 0.980
EGG86676.1
Hypothetical protein.
  
  
 0.979
EGG90119.1
Hypothetical protein.
 
   
 0.975
Your Current Organism:
Lachnospiraceae F0167
NCBI taxonomy Id: 575593
Other names: L. oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 strain F0167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.