STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGG92454.1Cadmium-translocating P-type ATPase. (616 aa)    
Predicted Functional Partners:
EGG92452.1
Hypothetical protein.
 
  
 0.999
EGG92453.1
Hypothetical protein.
 
 
 0.995
EGG92190.1
Pyruvate:ferredoxin oxidoreductase.
  
  
 0.988
EGG91405.1
Hypothetical protein.
  
 
 0.975
EGG90524.1
Hypothetical protein.
 
 
0.969
EGG91330.1
Hypothetical protein.
  
  
 0.957
EGG91818.1
Hypothetical protein.
  
  
 0.928
EGG92418.1
Hypothetical protein; Belongs to the TtcA family.
  
  
 0.918
EGG90525.1
Hypothetical protein.
 
  
 0.913
EGG92488.1
Hypothetical protein.
  
  
 0.883
Your Current Organism:
Lachnospiraceae F0167
NCBI taxonomy Id: 575593
Other names: L. oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 strain F0167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.