Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGG90874.1 | EGG90875.1 | HMPREF0491_02637 | HMPREF0491_02638 | Hypothetical protein. | Hypothetical protein. | 0.994 |
EGG90874.1 | EGG91135.1 | HMPREF0491_02637 | HMPREF0491_00316 | Hypothetical protein. | Hypothetical protein. | 0.915 |
EGG90874.1 | EGG91624.1 | HMPREF0491_02637 | HMPREF0491_00290 | Hypothetical protein. | Hypothetical protein. | 0.859 |
EGG90874.1 | EGG92190.1 | HMPREF0491_02637 | HMPREF0491_00217 | Hypothetical protein. | Pyruvate:ferredoxin oxidoreductase. | 0.942 |
EGG90874.1 | dapF | HMPREF0491_02637 | HMPREF0491_01625 | Hypothetical protein. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.861 |
EGG90874.1 | guaA | HMPREF0491_02637 | HMPREF0491_01718 | Hypothetical protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.944 |
EGG90874.1 | metG | HMPREF0491_02637 | HMPREF0491_00699 | Hypothetical protein. | Hypothetical protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.938 |
EGG90874.1 | murC | HMPREF0491_02637 | HMPREF0491_01887 | Hypothetical protein. | UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.864 |
EGG90874.1 | nnrD | HMPREF0491_02637 | HMPREF0491_00419 | Hypothetical protein. | YjeF; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | 0.863 |
EGG90874.1 | nnrE | HMPREF0491_02637 | HMPREF0491_02652 | Hypothetical protein. | Hypothetical protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | 0.863 |
EGG90875.1 | EGG90874.1 | HMPREF0491_02638 | HMPREF0491_02637 | Hypothetical protein. | Hypothetical protein. | 0.994 |
EGG90875.1 | EGG91135.1 | HMPREF0491_02638 | HMPREF0491_00316 | Hypothetical protein. | Hypothetical protein. | 0.915 |
EGG90875.1 | EGG91624.1 | HMPREF0491_02638 | HMPREF0491_00290 | Hypothetical protein. | Hypothetical protein. | 0.859 |
EGG90875.1 | EGG92190.1 | HMPREF0491_02638 | HMPREF0491_00217 | Hypothetical protein. | Pyruvate:ferredoxin oxidoreductase. | 0.942 |
EGG90875.1 | dapF | HMPREF0491_02638 | HMPREF0491_01625 | Hypothetical protein. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.861 |
EGG90875.1 | guaA | HMPREF0491_02638 | HMPREF0491_01718 | Hypothetical protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.944 |
EGG90875.1 | metG | HMPREF0491_02638 | HMPREF0491_00699 | Hypothetical protein. | Hypothetical protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.938 |
EGG90875.1 | murC | HMPREF0491_02638 | HMPREF0491_01887 | Hypothetical protein. | UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.864 |
EGG90875.1 | nnrD | HMPREF0491_02638 | HMPREF0491_00419 | Hypothetical protein. | YjeF; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | 0.863 |
EGG90875.1 | nnrE | HMPREF0491_02638 | HMPREF0491_02652 | Hypothetical protein. | Hypothetical protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | 0.863 |
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