STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGG90457.1Hypothetical protein. (269 aa)    
Predicted Functional Partners:
EGG90458.1
Hypothetical protein.
 
 
 0.999
EGG90459.1
Hypothetical protein.
 
  
 0.999
EGG92700.1
Hypothetical protein.
 
 
 0.998
EGG91336.1
Hypothetical protein.
 
  
 0.990
EGG91337.1
Hypothetical protein.
 
  
 0.976
EGG91338.1
Undecaprenyl-phosphate glucose phosphotransferase.
 
   
 0.975
EGG90456.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
     
 0.969
EGG90056.1
UDP-galactopyranose mutase.
  
  
 0.964
EGG90520.1
Hypothetical protein.
     
 0.958
EGG90115.1
Hypothetical protein.
 
  
 0.953
Your Current Organism:
Lachnospiraceae F0167
NCBI taxonomy Id: 575593
Other names: L. oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 strain F0167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.