STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGG90463.1Hypothetical protein. (278 aa)    
Predicted Functional Partners:
EGG90462.1
Hypothetical protein.
 
 0.993
EGG87797.1
Maltodextrin import ATP-binding protein msmX; Belongs to the ABC transporter superfamily.
 
 0.987
EGG90461.1
Hypothetical protein.
 
 
 0.980
EGG91704.1
Hypothetical protein.
 
 0.971
EGG91855.1
Hypothetical protein.
 
 0.970
EGG91578.1
Hypothetical protein.
 
 0.969
EGG86678.1
Hypothetical protein.
 
 0.969
EGG92349.1
Hypothetical protein.
 
 0.969
EGG91373.1
Hypothetical protein.
 
 0.969
EGG90653.1
Hypothetical protein.
 
 0.967
Your Current Organism:
Lachnospiraceae F0167
NCBI taxonomy Id: 575593
Other names: L. oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 strain F0167
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