STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGG88553.1Hypothetical protein. (335 aa)    
Predicted Functional Partners:
EGG86685.1
Hypothetical protein.
       0.656
EGG86686.1
Hypothetical protein.
       0.656
EGG86683.1
Hypothetical protein.
       0.651
EGG86681.1
Hypothetical protein.
       0.495
EGG88554.1
Hypothetical protein.
       0.465
EGG86682.1
Hypothetical protein.
       0.446
EGG91651.1
Hypothetical protein.
       0.446
EGG91458.1
Hypothetical protein.
       0.446
EGG91457.1
Hypothetical protein.
       0.440
EGG88552.1
Hypothetical protein.
       0.413
Your Current Organism:
Lachnospiraceae F0167
NCBI taxonomy Id: 575593
Other names: L. oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 strain F0167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.