STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGG85788.1Hypothetical protein. (230 aa)    
Predicted Functional Partners:
EGG92309.1
Hypothetical protein.
  
  
 0.902
EGG91833.1
Hypothetical protein.
 
   
 0.897
EGG87731.1
Hypothetical protein.
 
   
 0.895
EGG90628.1
Hypothetical protein.
 
   
 0.889
EGG91832.1
Hypothetical protein.
 
   
 0.886
EGG88770.1
Hypothetical protein.
 
   
 0.864
EGG88771.1
Hypothetical protein.
   
 0.803
EGG90475.1
Hypothetical protein.
  
  
 0.791
EGG89911.1
Hypothetical protein.
  
  
 0.791
EGG89913.1
Hypothetical protein.
  
  
 0.791
Your Current Organism:
Lachnospiraceae F0167
NCBI taxonomy Id: 575593
Other names: L. oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 str. F0167, Lachnospiraceae oral taxon 107 strain F0167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.