Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEU29972.1 | EEU30598.1 | HMPREF0501_00977 | HMPREF0501_00003 | Hypothetical protein. | Competence protein CoiA-like protein. | 0.628 |
| EEU29972.1 | EEU30792.1 | HMPREF0501_00977 | HMPREF0501_00197 | Hypothetical protein. | Hypothetical protein. | 0.404 |
| EEU29972.1 | ezrA | HMPREF0501_00977 | HMPREF0501_01031 | Hypothetical protein. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.681 |
| EEU30545.1 | EEU30598.1 | HMPREF0501_00923 | HMPREF0501_00003 | YihY family protein; Belongs to the UPF0761 family. | Competence protein CoiA-like protein. | 0.616 |
| EEU30597.1 | EEU30598.1 | HMPREF0501_00002 | HMPREF0501_00003 | Negative regulator of genetic competence (MecA); Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | Competence protein CoiA-like protein. | 0.683 |
| EEU30597.1 | EEU30599.1 | HMPREF0501_00002 | HMPREF0501_00004 | Negative regulator of genetic competence (MecA); Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | RelA/SpoT domain protein. | 0.526 |
| EEU30597.1 | EEU30601.1 | HMPREF0501_00002 | HMPREF0501_00006 | Negative regulator of genetic competence (MecA); Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.514 |
| EEU30597.1 | nadK | HMPREF0501_00002 | HMPREF0501_00005 | Negative regulator of genetic competence (MecA); Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.514 |
| EEU30598.1 | EEU29972.1 | HMPREF0501_00003 | HMPREF0501_00977 | Competence protein CoiA-like protein. | Hypothetical protein. | 0.628 |
| EEU30598.1 | EEU30545.1 | HMPREF0501_00003 | HMPREF0501_00923 | Competence protein CoiA-like protein. | YihY family protein; Belongs to the UPF0761 family. | 0.616 |
| EEU30598.1 | EEU30597.1 | HMPREF0501_00003 | HMPREF0501_00002 | Competence protein CoiA-like protein. | Negative regulator of genetic competence (MecA); Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | 0.683 |
| EEU30598.1 | EEU30599.1 | HMPREF0501_00003 | HMPREF0501_00004 | Competence protein CoiA-like protein. | RelA/SpoT domain protein. | 0.743 |
| EEU30598.1 | EEU30601.1 | HMPREF0501_00003 | HMPREF0501_00006 | Competence protein CoiA-like protein. | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.762 |
| EEU30598.1 | EEU30646.1 | HMPREF0501_00003 | HMPREF0501_00051 | Competence protein CoiA-like protein. | DNA internalization competence protein ComEC/Rec2-like protein. | 0.657 |
| EEU30598.1 | EEU30792.1 | HMPREF0501_00003 | HMPREF0501_00197 | Competence protein CoiA-like protein. | Hypothetical protein. | 0.608 |
| EEU30598.1 | cinA | HMPREF0501_00003 | HMPREF0501_01013 | Competence protein CoiA-like protein. | Competence/damage-inducible domain protein CinA; Belongs to the CinA family. | 0.692 |
| EEU30598.1 | ezrA | HMPREF0501_00003 | HMPREF0501_01031 | Competence protein CoiA-like protein. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.620 |
| EEU30598.1 | nadK | HMPREF0501_00003 | HMPREF0501_00005 | Competence protein CoiA-like protein. | NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.756 |
| EEU30599.1 | EEU30597.1 | HMPREF0501_00004 | HMPREF0501_00002 | RelA/SpoT domain protein. | Negative regulator of genetic competence (MecA); Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family. | 0.526 |
| EEU30599.1 | EEU30598.1 | HMPREF0501_00004 | HMPREF0501_00003 | RelA/SpoT domain protein. | Competence protein CoiA-like protein. | 0.743 |
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