STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30643.1PDZ domain family protein. (350 aa)    
Predicted Functional Partners:
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
 
  
 0.948
EEU30644.1
comEA protein.
     0.893
EEU30640.1
Hypothetical protein.
       0.824
EEU30641.1
RNA methyltransferase, RsmD family.
       0.824
EEU30639.1
Putative stage V sporulation protein E; Belongs to the SEDS family.
       0.813
typA
GTP-binding protein TypA.
       0.661
EEU30646.1
DNA internalization competence protein ComEC/Rec2-like protein.
       0.598
holA
DNA polymerase III, delta subunit.
       0.565
EEU30645.1
ComE operon protein 2.
       0.562
EEU30637.1
Inositol monophosphatase family protein.
       0.488
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.