STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30719.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
EEU30922.1
LysR substrate binding domain protein; Belongs to the LysR transcriptional regulatory family.
  
     0.663
EEU30275.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.638
EEU30718.1
Transporter, CPA2 family.
       0.550
EEU30720.1
Hypothetical protein.
     
 0.528
EEU30721.1
Oxidoreductase, aldo/keto reductase family protein.
       0.527
EEU30724.1
Hypothetical protein; 5' partial; truncated CDS; unextendable partial coding region.
 
     0.525
EEU30714.1
Transcriptional regulator, AraC family.
 
  
 0.491
EEU30399.1
FeoA domain protein; 5' partial; truncated CDS; unextendable partial coding region.
  
 
 0.453
EEU30722.1
Oxidoreductase, short chain dehydrogenase/reductase family protein.
     
 0.434
EEU30723.1
Putative morphine 6-dehydrogenase.
       0.434
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.