STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30794.1LysM domain protein. (190 aa)    
Predicted Functional Partners:
cinA
Competence/damage-inducible domain protein CinA; Belongs to the CinA family.
 
 
  0.902
EEU30757.1
Putative N-acetylmuramoyl-L-alanine amidase.
 
  
 0.896
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
 0.875
cmk
Cytidylate kinase.
  
 
  0.870
EEU30796.1
Putative ribosomal protein S1.
 
    0.662
EEU30518.1
Gram-positive signal peptide protein, YSIRK family.
   
 
 0.657
EEU30792.1
Hypothetical protein.
       0.649
EEU30793.1
ATP-dependent DNA helicase, RecQ family.
  
    0.619
EEU31108.1
Hypothetical protein.
  
     0.606
mreD
Rod shape-determining protein MreD.
  
   
 0.604
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.