STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30841.1Putative oligopeptide ABC transporter, permease protein OppC. (327 aa)    
Predicted Functional Partners:
oppD
Oligopeptide ABC transporter, ATP-binding protein OppD; Truncated CDS; Belongs to the ABC transporter superfamily.
 
 0.999
EEU30842.1
Putative oligopeptide transport system permease protein OppB.
 
 0.999
EEU30843.1
ABC transporter, substrate-binding protein, family 5.
 
 0.999
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 
  0.915
EEU30334.1
Putative choline ABC transporter, ATP-binding protein OpuBA.
 
      0.897
glnQ
Glutamine ABC transporter, ATP-binding protein GlnQ.
    
 0.859
artM
Arginine ABC transporter, ATP-binding protein ArtM.
    
 0.840
gluA
Glutamate ABC transporter, ATP-binding protein GluA.
    
 0.834
EEU29701.1
ABC transporter, ATP-binding protein.
 
 
    0.791
EEU30303.1
ABC transporter, ATP-binding protein.
 
 
 0.781
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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