STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30860.1SNARE-like domain protein. (236 aa)    
Predicted Functional Partners:
EEU30859.1
Hypothetical protein; Truncated CDS.
       0.774
EEU30892.1
LPXTG-motif cell wall anchor domain protein.
 
     0.606
EEU29765.1
Glycerophosphodiester phosphodiesterase family protein.
 
     0.585
EEU29716.1
Gram-positive signal peptide protein, YSIRK family.
  
     0.579
EEU30293.1
Hypothetical protein.
 
     0.549
EEU30674.1
Acyltransferase.
   
 0.542
EEU29850.1
Hypothetical protein.
 
     0.537
EEU30925.1
LPXTG-motif cell wall anchor domain protein; 5' partial; truncated CDS; unextendable partial coding region.
 
     0.532
EEU29888.1
Hypothetical protein.
  
     0.525
EEU30354.1
Hypothetical protein.
 
     0.481
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.