STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30883.1Hypothetical protein. (339 aa)    
Predicted Functional Partners:
EEU30885.1
Nodulation protein L family protein.
       0.754
EEU30884.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.744
EEU30882.1
Hypothetical protein.
 
     0.672
EEU30551.1
Hypothetical protein.
   
 
 0.670
EEU30553.1
Hypothetical protein.
   
 
 0.670
EEU30555.1
Putative lipopolysaccharide 1,6-galactosyltransferase.
   
 
 0.670
EEU30558.1
Putative lipopolysaccharide 1,6-galactosyltransferase.
   
 
 0.670
EEU30592.1
Glycosyltransferase, group 1 family protein.
   
 
 0.670
EEU30593.1
Glycosyltransferase, group 1 family protein.
   
 
 0.670
EEU30923.1
Cupin domain protein.
 
    0.593
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.