STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30921.1Hypothetical protein. (450 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.920
EEU30922.1
LysR substrate binding domain protein; Belongs to the LysR transcriptional regulatory family.
 
     0.674
EEU30598.1
Competence protein CoiA-like protein.
  
     0.560
EEU30920.1
Hypothetical protein.
       0.520
EEU30545.1
YihY family protein; Belongs to the UPF0761 family.
 
    0.496
EEU30923.1
Cupin domain protein.
       0.435
kup
Potassium transporter; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.
       0.415
EEU30924.1
Carboxymuconolactone decarboxylase family protein.
       0.412
trxA-2
Thioredoxin; Belongs to the thioredoxin family.
  
    0.410
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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