Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEU30609.1 | EEU30958.1 | HMPREF0501_00014 | HMPREF0501_00363 | Putative penicillin-binding protein 2B. | Penicillin-binding protein, 1A family. | 0.978 |
| EEU30609.1 | EEU31009.1 | HMPREF0501_00014 | HMPREF0501_00414 | Putative penicillin-binding protein 2B. | Putative serine/threonine-protein kinase PrkC. | 0.929 |
| EEU30609.1 | EEU31119.1 | HMPREF0501_00014 | HMPREF0501_00524 | Putative penicillin-binding protein 2B. | Penicillin-binding protein, transpeptidase domain protein. | 0.953 |
| EEU30609.1 | EEU31169.1 | HMPREF0501_00014 | HMPREF0501_00574 | Putative penicillin-binding protein 2B. | Penicillin-binding protein, 1A family. | 0.977 |
| EEU30609.1 | ezrA | HMPREF0501_00014 | HMPREF0501_01031 | Putative penicillin-binding protein 2B. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.697 |
| EEU30609.1 | gpsB | HMPREF0501_00014 | HMPREF0501_00360 | Putative penicillin-binding protein 2B. | Cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | 0.689 |
| EEU30609.1 | mreC | HMPREF0501_00014 | HMPREF0501_01022 | Putative penicillin-binding protein 2B. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.911 |
| EEU30956.1 | EEU30958.1 | HMPREF0501_00361 | HMPREF0501_00363 | Hypothetical protein; Belongs to the UPF0398 family. | Penicillin-binding protein, 1A family. | 0.680 |
| EEU30956.1 | gpsB | HMPREF0501_00361 | HMPREF0501_00360 | Hypothetical protein; Belongs to the UPF0398 family. | Cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | 0.684 |
| EEU30956.1 | recU | HMPREF0501_00361 | HMPREF0501_00362 | Hypothetical protein; Belongs to the UPF0398 family. | Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | 0.688 |
| EEU30958.1 | EEU30609.1 | HMPREF0501_00363 | HMPREF0501_00014 | Penicillin-binding protein, 1A family. | Putative penicillin-binding protein 2B. | 0.978 |
| EEU30958.1 | EEU30956.1 | HMPREF0501_00363 | HMPREF0501_00361 | Penicillin-binding protein, 1A family. | Hypothetical protein; Belongs to the UPF0398 family. | 0.680 |
| EEU30958.1 | EEU31009.1 | HMPREF0501_00363 | HMPREF0501_00414 | Penicillin-binding protein, 1A family. | Putative serine/threonine-protein kinase PrkC. | 0.638 |
| EEU30958.1 | EEU31119.1 | HMPREF0501_00363 | HMPREF0501_00524 | Penicillin-binding protein, 1A family. | Penicillin-binding protein, transpeptidase domain protein. | 0.934 |
| EEU30958.1 | EEU31169.1 | HMPREF0501_00363 | HMPREF0501_00574 | Penicillin-binding protein, 1A family. | Penicillin-binding protein, 1A family. | 0.948 |
| EEU30958.1 | ezrA | HMPREF0501_00363 | HMPREF0501_01031 | Penicillin-binding protein, 1A family. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.594 |
| EEU30958.1 | gpsB | HMPREF0501_00363 | HMPREF0501_00360 | Penicillin-binding protein, 1A family. | Cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | 0.922 |
| EEU30958.1 | mreC | HMPREF0501_00363 | HMPREF0501_01022 | Penicillin-binding protein, 1A family. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.684 |
| EEU30958.1 | recU | HMPREF0501_00363 | HMPREF0501_00362 | Penicillin-binding protein, 1A family. | Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | 0.886 |
| EEU31009.1 | EEU30609.1 | HMPREF0501_00414 | HMPREF0501_00014 | Putative serine/threonine-protein kinase PrkC. | Putative penicillin-binding protein 2B. | 0.929 |
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