STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
recURecombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. (211 aa)    
Predicted Functional Partners:
EEU30958.1
Penicillin-binding protein, 1A family.
  
 0.886
gpsB
Cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
 
   
 0.864
EEU30673.1
Hypothetical protein.
  
     0.767
recJ
single-stranded-DNA-specific exonuclease RecJ.
   
  
 0.763
EEU29591.1
Transcriptional regulator, Spx/MgsR family; Belongs to the ArsC family.
  
     0.730
EEU30631.1
ArsC family protein; Belongs to the ArsC family.
  
     0.703
EEU30956.1
Hypothetical protein; Belongs to the UPF0398 family.
  
    0.688
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
      
 0.685
EEU31149.1
Primosomal protein DnaI.
 
   
 0.682
EEU30019.1
DNA repair protein RadC family protein; Truncated CDS.
   
  
 0.670
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.