STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30969.1Hypothetical protein. (172 aa)    
Predicted Functional Partners:
dinG
Putative DnaQ family exonuclease/DinG family helicase; 3'-5' exonuclease.
 
    0.846
asnS
asparagine--tRNA ligase.
       0.786
EEU30967.1
DnaD domain protein.
 
     0.735
EEU30807.1
Hypothetical protein.
  
    0.707
EEU30787.1
Hypothetical protein.
  
     0.670
EEU29736.1
YycH protein.
  
     0.667
EEU29735.1
YycH protein.
  
     0.657
mvk
Mevalonate kinase.
 
     0.644
EEU30973.1
Phosphomevalonate kinase.
 
     0.634
EEU29956.1
CBS domain protein.
  
     0.593
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.