STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU31073.1HNH endonuclease domain protein; Truncated CDS. (104 aa)    
Predicted Functional Partners:
EEU31074.1
Hypothetical protein.
 
     0.854
EEU31071.1
DnaD domain protein.
 
     0.812
EEU31072.1
Single-strand binding family protein.
       0.777
EEU31068.1
Hypothetical protein.
       0.764
EEU31065.1
Hypothetical protein.
       0.762
EEU31066.1
Hypothetical protein.
       0.762
EEU31067.1
Hypothetical protein.
       0.762
EEU31069.1
Hypothetical protein.
       0.762
EEU31070.1
Hypothetical protein.
       0.762
EEU31075.1
Erf family protein.
 
     0.754
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.