STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU31091.1DNA-binding helix-turn-helix protein. (110 aa)    
Predicted Functional Partners:
EEU31093.1
Hypothetical protein.
       0.720
EEU31092.1
Hypothetical protein.
       0.718
EEU29679.1
DNA-binding helix-turn-helix protein.
 
   
 0.673
EEU31094.1
Hypothetical protein.
       0.672
EEU30119.1
DNA-binding helix-turn-helix protein.
 
   
 0.582
EEU31090.1
DNA-binding helix-turn-helix protein.
       0.526
EEU31089.1
Hypothetical protein.
       0.446
EEU31096.1
Hypothetical protein.
  
    0.418
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.