STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU31134.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. (495 aa)    
Predicted Functional Partners:
arlR
Response regulator ArlR.
 0.997
EEU29867.1
Putative transcriptional activator protein CopR.
 0.979
EEU29611.1
Response regulator receiver domain protein.
 0.970
walR
Transcriptional regulatory protein WalR.
 0.963
EEU30076.1
Putative transcriptional regulatory protein ResD.
 0.950
EEU29578.1
Transcriptional regulatory protein, C-terminal domain protein; Truncated CDS.
 
 0.893
EEU30700.1
Response regulator receiver domain protein.
 0.889
pdhC
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.872
EEU29878.1
Response regulator receiver domain protein.
  
 0.788
bkdA
2-oxoisovalerate dehydrogenase subunit beta.
    
 0.786
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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