STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU31168.1Hypothetical protein; Belongs to the UPF0342 family. (116 aa)    
Predicted Functional Partners:
EEU31167.1
HD domain protein.
  
    0.722
EEU31169.1
Penicillin-binding protein, 1A family.
       0.718
EEU29994.1
Hypothetical protein; Belongs to the UPF0473 family.
 
     0.650
EEU30467.1
CamS sex pheromone family protein.
  
     0.583
secG
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
  
 0.557
EEU30673.1
Hypothetical protein.
  
    0.540
EEU30598.1
Competence protein CoiA-like protein.
  
     0.440
cvpA
CvpA family protein.
  
     0.438
EEU30640.1
Hypothetical protein.
 
    0.431
argS
arginine--tRNA ligase.
       0.421
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.