STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30232.1Mannitol dehydrogenase domain protein. (548 aa)    
Predicted Functional Partners:
uxaC
Glucuronate isomerase.
 
 
 0.991
EEU30949.1
PRD domain protein.
  
 
 0.953
EEU29704.1
Putative chlorophyll synthesis pathway protein BchC.
    
 0.865
EEU29648.1
Transcriptional regulator, GntR family.
 
   
 0.793
pdxB-2
4-phosphoerythronate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.776
gntK
Gluconokinase; Belongs to the FGGY kinase family.
    
 0.732
EEU30234.1
Hypothetical protein.
 
     0.698
gudD
Glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
    
 0.572
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.563
EEU29642.1
Polygalacturonase (pectinase); Belongs to the glycosyl hydrolase 28 family.
 
     0.560
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.