STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30273.1Putative mannose permease IID component; Truncated CDS. (310 aa)    
Predicted Functional Partners:
EEU30272.1
PTS system sorbose subfamily IIB component; Truncated CDS.
 
 0.996
ptsH
Phosphocarrier protein HPr.
    
 0.949
EEU30071.1
Putative fructokinase; Truncated CDS.
  
 
  0.934
EEU29719.1
PTS system, beta-glucoside-specific, IIABC component.
 
  
 0.799
EEU30363.1
PTS system sucrose-specific IIBC component.
 
  
 0.750
EEU30275.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.743
EEU30834.1
PTS system beta-glucoside-specific EIIBCA component family protein.
  
  
 0.716
EEU30271.1
Hypothetical protein.
       0.630
pdxB-2
4-phosphoerythronate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.572
EEU30361.1
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.562
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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