STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30295.1DNA-binding helix-turn-helix protein. (137 aa)    
Predicted Functional Partners:
EEU30294.1
Hypothetical protein.
 
     0.907
cinA
Competence/damage-inducible domain protein CinA; Belongs to the CinA family.
    
 0.870
EEU31107.1
Hypothetical protein.
  
     0.769
EEU31106.1
Hypothetical protein.
  
     0.767
EEU30746.1
Hypothetical protein.
  
     0.766
EEU31108.1
Hypothetical protein.
  
     0.755
EEU30584.1
Hypothetical protein.
  
     0.732
EEU29687.1
Hypothetical protein.
  
     0.725
EEU30628.1
Tetratricopeptide repeat protein.
 
  
 0.678
EEU29675.1
Hypothetical protein.
  
     0.677
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.