STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30297.1Transcriptional regulator, LacI family. (338 aa)    
Predicted Functional Partners:
EEU30834.1
PTS system beta-glucoside-specific EIIBCA component family protein.
    
 0.906
EEU30363.1
PTS system sucrose-specific IIBC component.
    
 0.906
EEU29719.1
PTS system, beta-glucoside-specific, IIABC component.
    
 0.906
gph
Glycoside/pentoside/hexuronide transporter.
 
   
 0.827
EEU29693.1
Transcriptional regulator, LacI family.
  
   
 0.771
EEU30338.1
Transcriptional regulator, LacI family; Truncated CDS.
  
     0.760
EEU30349.1
Transcriptional regulator, LacI family.
  
     0.744
ptsH
Phosphocarrier protein HPr.
   
 
 0.724
EEU30296.1
Hypothetical protein.
       0.718
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.667
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.