STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30303.1ABC transporter, ATP-binding protein. (461 aa)    
Predicted Functional Partners:
EEU30302.1
Cobalt transport protein.
 
 0.996
ecfT
Cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.941
EEU29724.1
Hypothetical protein.
 
  
 0.902
oppD
Oligopeptide ABC transporter, ATP-binding protein OppD; Truncated CDS; Belongs to the ABC transporter superfamily.
  
 
0.881
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
0.848
EEU30842.1
Putative oligopeptide transport system permease protein OppB.
  
 
 0.785
EEU30841.1
Putative oligopeptide ABC transporter, permease protein OppC.
 
 
 0.781
EEU30843.1
ABC transporter, substrate-binding protein, family 5.
  
 
 0.682
EEU30301.1
Hypothetical protein.
       0.666
EEU29908.1
PAP2 family protein.
 
     0.607
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.