STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ltaSGlycerol phosphate lipoteichoic acid synthase 1. (709 aa)    
Predicted Functional Partners:
ltaS-2
Glycerol phosphate lipoteichoic acid synthase 1.
  
 
 
0.936
EEU30593.1
Glycosyltransferase, group 1 family protein.
    
 0.869
EEU30306.1
Nitroreductase family protein.
       0.633
EEU30808.1
Hypothetical protein; Belongs to the UPF0346 family.
  
     0.609
EEU29972.1
Hypothetical protein.
  
     0.573
EEU30799.1
Tetratricopeptide repeat protein.
 
    0.535
EEU30308.1
Hypothetical protein.
       0.522
htrA
Serine protease do-like HtrA.
      
 0.487
cshA
DEAD-box ATP-dependent RNA helicase CshA; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily.
      
 0.474
EEU30643.1
PDZ domain family protein.
 
     0.465
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.