STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30333.1Transcriptional regulator, Rrf2 family. (146 aa)    
Predicted Functional Partners:
EEU30332.1
NmrA family protein.
 
  
 0.890
iscS
Cysteine desulfurase.
  
 
 0.776
EEU30025.1
Putative cysteine desulfurase.
  
 
 0.776
EEU30335.1
ABC transporter, substrate-binding protein, QAT family.
       0.702
EEU30325.1
SUF system FeS assembly protein, NifU family.
  
  
 0.611
EEU30334.1
Putative choline ABC transporter, ATP-binding protein OpuBA.
       0.584
EEU30155.1
biotin--[acetyl-CoA-carboxylase] ligase.
  
  
 0.528
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.