STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30357.1Penicillin-binding protein, transpeptidase domain protein. (269 aa)    
Predicted Functional Partners:
EEU30331.1
DHHA1 domain protein.
  
     0.739
EEU30845.1
Hypothetical protein.
  
     0.646
EEU30952.1
Hypothetical protein.
 
     0.533
EEU31169.1
Penicillin-binding protein, 1A family.
 
 
 0.533
hupB
DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
     
 0.495
EEU30826.1
Beta-lactamase.
    
 0.494
EEU30060.1
Beta-lactamase.
    
 0.494
EEU30958.1
Penicillin-binding protein, 1A family.
 
 
 0.478
EEU30852.1
DNA/RNA non-specific endonuclease.
 
     0.467
EEU31100.1
Hypothetical protein.
  
     0.451
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.