STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU30375.1LysR substrate binding domain protein; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
EEU30376.1
Putative NAD-dependent malic enzyme 3.
 
   
 0.798
EEU30377.1
Auxin efflux carrier.
 
   
 0.750
EEU30922.1
LysR substrate binding domain protein; Belongs to the LysR transcriptional regulatory family.
  
     0.684
EEU30731.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.514
EEU30399.1
FeoA domain protein; 5' partial; truncated CDS; unextendable partial coding region.
  
 
 0.453
EEU30378.1
Hypothetical protein; 5' partial; truncated CDS; unextendable partial coding region.
   
 
 0.412
EEU30275.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.402
Your Current Organism:
Lactobacillus coleohominis
NCBI taxonomy Id: 575594
Other names: L. coleohominis 101-4-CHN, Lactobacillus coleohominis 101-4-CHN
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